Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015952603.1_cds_XP_016492196.1_82432
CDS Infomation

[gene=LOC107811721] [db_xref=GeneID:107811721] [protein=U4/U6 small nuclear ribonucleoprotein Prp3-like] [protein_id=XP_016492196.1] [location=join(10366..10935,12348..12632,12888..13352,13441..13635,13747..13910,14672..15557)] [gbkey=CDS]
Sequence

ATGGAGAGAGAGAAATCGAGTAGGAGAGAACGAGCATCCAGAGAGGACGACGACGACCGC
CGCCATCATCATCGCGACCGTTCGAAGCACCACCACCGCGACGATGAGAACCGACACCGA
TCCGATGATCGAAAAGGTCGCGATCGCGAAAGGCGTCGCGAGAAATCACACGAATCGGAA
GTTATCAGAGAAAAATCTTACGATAGAGAGGATTCCTTGGAGAGAAGGCATTCGCATAGG
AGGAAAGACGATCGAGAGAAACGCGAGAAATCGTATGAGAGAGAGGATTCAGTGGAGAGA
AAGAATGCGCATAAGAGGAAAGAGAGAGGAGAAGAGAGTGTGGATAAGAGCAATGGAGGA
GATGAGAAGAGAGCTAGGGTTTCGGAGGATAAGAAGGAGGAGAGAAGAGAGAGGAGGAGA
TTTGATGATAAAGTGAAGAAGGAGGAGGAAGAGGATGTGGAAATTGATGAAGAAATGAAG
GGGAAAAGATTTGAAATGAGAATTGTGAAGGAAGAACCGAAACCCGAGCCCAATAATGAT
AATGGTCACGGTGTTGGTTCCATTGATAATGGTGTGACAATGGGACCATACAATGCAGCA
TCAAGGACCTCCCCAGATAAATCTTTGACTCGTATTGATCCTCCTGTTACCAAGGTATCT
TCAATTTCTACAACAAATGAAAATAAGGGAGTTAATATTAACAGATCTCATGCGGTTCCT
GGGAAATCTAGTACAGATGGGGCAGCTTCTGATGCTGGCAAGAGTGCCACCTTATCCCTT
GATGCCAAAGGAAATGCAAAGGCTCTCATACAAAGGCAGAAGGAGCTGGCAGCAAAGCTT
AAGAAAATTCCTTTGCTAAACAAGGGTGCCGACTTTACGAGAGAGGGAAGTTCACAGATT
GGTCGCAAGGATAGCCTTTATGCCGCTTCAACAGATGCGGGGATATTGCCCCCACCGGTT
GCATCTTCAAATTCAGGGATATTACCCACTCCAAGTTCAGCACCTAGCACATCGACTATA
GCTACTGTGGCTTCTGCAAATACGCCACCCAGTGGCTTACCTCAGGTCGTGGGGCTCACA
GTCACAGCACAGAACTACGATAAAGTGAAGCGTGCACATGAGCTTTTTGCTAAGATGGGA
TTCCGGCAGGACCCGGAGTTTCCCCCCCTCATTAACATGTTTCCTGGGCAAATGCCTCCA
GAGGTTACCATTCAGCCAAAACCCGCTAGAGCCCCTGTTCTTCGTTTGGATGCATTAGGC
AGGGAAATCGATGAACAGGGAAATGTGGTTAATGTGCCTAAGCCATCTAGCACCCTTAAG
GTGAACATCAACAAGCAGAAAAAAGAAAACTTCCAAATTCTCAAACCTGAACTTGATGTT
GATCCTGATAAAAATCCTCATTTTGATCCAAGGATGGGGATTGACAAGAACAAAATTTTG
AGGCCAAAGAGGATGTCATTTCAGTTTGTGGAGGAAGGTAAATGGTCCCATGATGCAGAA
TTAATTAAGTTAAAGCAAAGCCAATATGGTGAATCACGAGCCAAAGAGTTGAGGGCAAAG
CAAATGCAATTGGCAAAGGCAAAAGCAGAGCCTGACATAAATCCAAATCTTATTGAGGTG
GCAGAGAGGGTTATCACCAAGGAAAAACCAAAGGAACCAATTCCTGATGTTGAGTGGTGG
GATGCTCCTCTGTTACGATCTGGTACTTATGGTGGTATGGTCGATGGTGACTTAACTGAT
GATATGTTGAGGATGGAGAAGATCACTATTTATGTTGAACACCCCCGCCCTATTGAGCCT
CCTGCTGAACCTGCTCCACCTCCTCCACAACCATTGAAGCTGACCAAGAAGGAGCAGAAG
AAACTACGTACCCAGCGTCGACTGGCTAGGGAGAAAGAAAGGCAGGAAATGATACGTCAG
GGCCTGTTAGAACCACCAAAACCAAAAGTTAAAATGAGCAATCTTATGAAAGTTCTTGGC
TCAGAAGCCACTCAGGATCCCACAAAGCTTGAAATGGAGATCAGAAGTGCTGCTGCTGAG
CGAGAACAGGCTCACATAGACAGAAATATTGCTCGAAAGCTCACTCCTGATGAACGTCGT
GAGAAGAAAGAAAGAAAACTATTTGATGATCCAAATATCGCAGCGGAGACGATAGTTTCG
ATATACAGAGTTAATGACCTTTCACACCCTCAAACTCGCTTCAAAGTTGATGTTAATGCT
CAGGAGAATCGGATGACTGGGTGTGCAGTTATCTCGGAAGGTATAAGTGTGGTGGTAGTT
GAAGGTGGTAAAAAGTCCATCAAGCGGTATGGGAAACTTATGCTTAGGCGAATAGACTGG
GCTGCTGCTGTTAAGAAAGAAGATGATGAAGACGAAGATGAAGATGAAGATAAGCCTCTC
AACAAGTGTGTGTTAGTCTGGCAAGGGACTGTTGCTAAATCAAGCTTCCATAGATTTTTT
GTTCACGAGTGCAGGACTGAGGCTGCTGCTCGTAAGGTCTTTGCTGATGCTGGGGTTCCT
CATTACTGGGATCTTGCTGTAAACTTCAAAGATGATGAATTTTAG

Peptide Sequence

PEP ID

XP_016492196.1
PEP Infomation

PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3-like [Nicotiana tabacum]
Sequence

MEREKSSRRERASREDDDDRRHHHRDRSKHHHRDDENRHRSDDRKGRDRERRREKSHESE
VIREKSYDREDSLERRHSHRRKDDREKREKSYEREDSVERKNAHKRKERGEESVDKSNGG
DEKRARVSEDKKEERRERRRFDDKVKKEEEEDVEIDEEMKGKRFEMRIVKEEPKPEPNND
NGHGVGSIDNGVTMGPYNAASRTSPDKSLTRIDPPVTKVSSISTTNENKGVNINRSHAVP
GKSSTDGAASDAGKSATLSLDAKGNAKALIQRQKELAAKLKKIPLLNKGADFTREGSSQI
GRKDSLYAASTDAGILPPPVASSNSGILPTPSSAPSTSTIATVASANTPPSGLPQVVGLT
VTAQNYDKVKRAHELFAKMGFRQDPEFPPLINMFPGQMPPEVTIQPKPARAPVLRLDALG
REIDEQGNVVNVPKPSSTLKVNINKQKKENFQILKPELDVDPDKNPHFDPRMGIDKNKIL
RPKRMSFQFVEEGKWSHDAELIKLKQSQYGESRAKELRAKQMQLAKAKAEPDINPNLIEV
AERVITKEKPKEPIPDVEWWDAPLLRSGTYGGMVDGDLTDDMLRMEKITIYVEHPRPIEP
PAEPAPPPPQPLKLTKKEQKKLRTQRRLAREKERQEMIRQGLLEPPKPKVKMSNLMKVLG
SEATQDPTKLEMEIRSAAAEREQAHIDRNIARKLTPDERREKKERKLFDDPNIAAETIVS
IYRVNDLSHPQTRFKVDVNAQENRMTGCAVISEGISVVVVEGGKKSIKRYGKLMLRRIDW
AAAVKKEDDEDEDEDEDKPLNKCVLVWQGTVAKSSFHRFFVHECRTEAAARKVFADAGVP
HYWDLAVNFKDDEF

Transcript Sequence

Gene sequence data has not been registered.